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Mind Your Microbiome

  • Writer: Christina C Wilson
    Christina C Wilson
  • Jan 18, 2021
  • 3 min read

Updated: Jan 21, 2021

Hippocrates was on to something when he wrote that all diseases begin in our guts.

Deep in our intestines is a diverse ecosystem collectively referred to as the gut microbiome. Proper care and feeding of this ecosystem affects almost every aspect of our health—our immune function, brain function, nervous and endocrine systems, metabolism, weight, and digestion. Additionally, increased intestinal permeability (aka "leaky gut") and altered gut flora has also been linked to autoimmune disorders, skin problems, and psychological and mood issues. Emerging evidence suggests that microbiome composition and function are associated with the development of obesity and metabolic disease.

The Gut-Brain Connection


Are you familiar with the expression "a gut feeling?" It's a real thing— and there's a reason our gut is being called the second brain. The term "gut-brain axis" refers to the chatting between the gut and the brain via the vagus nerve. Neurotransmitters produced in the gut also affect the brain and vice versa. When the balance between good and bad bacteria in the gut becomes disrupted (gut dysbiosis), this can cause cognitive and mood problems such as depression and anxiety.


Fun fact: 90% of serotonin receptors are located in the gut. 90%! Supporting gut health helps increase your levels of serotonin (yep, the "happy" neurotransmitter) and GABA (the neurotransmitter linked to feelings of relaxation).


Scientists are continuously discovering more about our microbiome. An essential key to overall health is maintaining a diverse and balanced gut microbiome and a healthy, well-functioning gut lining.


10 Tips to Boost Gut Health

Ditch or minimize sugar. You already know this. Processed and sugary foods can decrease the number of good bacteria and feed the harmful bacteria in your gut. Lousy gut flora loves sugar. Gut flora imbalance can cause increased sugar cravings, which can keep your gut in a vicious cycle.


Eat foods packed with probiotics. Eat naturally fermented foods, like sauerkraut, kefir, yogurt, kombucha, and kimchi.


Eat prebiotics. Prebiotics provide food for the beneficial bacteria in your gut. Great prebiotic food sources include asparagus, jicama, unripe bananas, onions, garlic, and artichokes.

Get sufficient fiber each day. Fiber feeds the microbiome, and low-fiber diets reduce microbial diversity. Work up to 35-45 g a day in a variety of fiber. Good sources are beans, lentils, peas, artichoke, broccoli, avocado, chia seeds, berries, pears, apples, and oats. Gradually increase your fiber; otherwise, bloating and gas may ensue.


Take the supplement L-glutamine.


Drink bone broth. Bone broth and other sources of collagen and glycine can help repair gut integrity.


Take a probiotic supplement. Eating real food with probiotics bacteria strains, particularly from both the Lactobacillus and Bifidobacterium families. If you have to take an antibiotic for a bacterial infection, take a broad-spectrum probiotic at least 2 hours after each dose and continue for at least two weeks after taking the antibiotic.


Omega-3 fats. Omega-3s increase the production of anti-inflammatory compounds and help strengthen the immune system by positively influencing gut bacteria. Omega-3 fatty acids are found in fatty fish like salmon, mackerel, sardines, and anchovies. Walnuts, flax, chia, and pumpkin seeds are also good plant sources of omega3's. Be mindful that while these particular plant sources provide Omega-3 (ALA), only about 10-15% converts into a usable format (EPA), so they aren't as bioavailable as fish sources.

Reacquaint your immune system with microbes: work with soil, garden, play on a farm, go camping, open your windows, own a dog or cat, and get out in nature.

Modify high-stress lifestyles. It's essential to find relaxed states each day, especially when eating. High-stress impacts intestinal barrier function, gut permeability, and microbiome composition.


"Moises Velasquez-Manoff, "Among Trillions of Microbes in the Gut, A Few Are Special," Scientific American, March 1, 2015,

"M. Conlon and A. Bird, "The Impact of Diet and Lifestyle on Gut Microbiota and Human Health," Nutrients 7 (2014): 17–44."

"Joanne Slavin, "Fiber and Prebiotics: Mechanisms and Health Benefits," Nutrients 5, no. 4 (2013): 1417–1435."

Niamh Michail, "Lack of Diversity in Processed Foods May be Causing Obesity and Cancer," FoodNavigator.com, May 20, 2015,


 
 
 

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